A genome map of a native lime could pave the way for the development of disease-resistant citrus varieties

Australian researchers have reached a milestone in their search for a solution to citrus greening after mapping the genome of a native lime species.

Citrus garrawayi, one of a number of native Australian citrus species credit Megan Pope

Citrus garrawayi, one of a number of native Australian citrus species credit Megan Pope

Image: Megan Pope

Researchers from The University of Queensland have sequenced the genome of the Australian round lime, also known as the Gympie lime, and are now looking at five other native citrus species including the finger lime.

PhD candidate Upuli Nakandala said the work aimed to identify a gene that provides resistance to Huanglongbing (HLB), also known as citrus greening, that could be incorporated into commercial citrus varieties.

“The species citrus australis is recognised as HLB-resistant so we put it first on our list,” Nakandala said.

“HLB is a huge problem for citrus growers across a number of growing areas including California and Florida in the United States and in Africa, (butt) HLB is not currently present in Australia.

Nakandala said industry has been trying to control this disease using chemicals and other methods but so far, no permanent solution has been found.

“One option available is to develop resistant cultivars, and the first step towards that is identifying these important resistant genes in Australian citrus,” she explained.

Upuli Nakandala and Prof Robert Henry with a native Mount White lime credit Megan Pope

Upuli Nakandala and Prof Robert Henry with a native Mount White lime credit Megan Pope

Image: Megan Pope

The University of Queensland’s Professor Robert Henry said mapping the genome of Australian round limes achieved that aim.

“Sequencing the genomes of plants, particularly these tree crops will give us a new platform for genetic improvements and better management of their production into the future and our research team has the right technology at the right time,” Henry said.

“We have placed ourselves at the cutting edge of that technology and we have the climate and the crops here that put us in a great position to make an important contribution to international efforts to solve this devastating disease problem.”

Henry said the team was also working on genomes for other tree crop species.

“We’re looking at a number of horticultural crops including macadamia, almond and mango – a wide range of species that are important in Australia and will provide the science background that we need to advance these crops,” he said.

The research was funded by Hort Innovation and The Queensland Department of Agriculture and Fisheries.